Serveur d'exploration sur le peuplier

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

A set of novel DNA polymorphisms within candidate genes potentially involved in ecological divergence between Populus alba and P. tremula, two hybridizing European forest trees.

Identifieur interne : 003A04 ( Main/Exploration ); précédent : 003A03; suivant : 003A05

A set of novel DNA polymorphisms within candidate genes potentially involved in ecological divergence between Populus alba and P. tremula, two hybridizing European forest trees.

Auteurs : Jeffrey A. Joseph [Royaume-Uni] ; Christian Lexer

Source :

RBID : pubmed:21585752

Abstract

We have identified 53 DNA (single nucleotide, microsatellite, and insertion-deletion) polymorphisms within 12 candidate genes potentially involved in ecological differences between Populus alba and P. tremula, two hybridizing European forest trees. The genes represent candidates for functional roles associated with abiotic or biotic stress response, cross-talk, phenology, and leaf development. Distributions within sequences, intraspecific levels of diversity, and genetic divergence (F(ST) ) between species are reported for each polymorphism, as are haplotype frequencies for each gene. The markers will be used for population genomic studies of the barrier to gene flow between these two ecologically divergent forest trees.

DOI: 10.1111/j.1471-8286.2007.01919.x
PubMed: 21585752


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">A set of novel DNA polymorphisms within candidate genes potentially involved in ecological divergence between Populus alba and P. tremula, two hybridizing European forest trees.</title>
<author>
<name sortKey="Joseph, Jeffrey A" sort="Joseph, Jeffrey A" uniqKey="Joseph J" first="Jeffrey A" last="Joseph">Jeffrey A. Joseph</name>
<affiliation wicri:level="1">
<nlm:affiliation>Jodrell Laboratory, Royal Botanic Gardens Kew, Richmond, Surrey, TW9 3DS, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Jodrell Laboratory, Royal Botanic Gardens Kew, Richmond, Surrey, TW9 3DS</wicri:regionArea>
<wicri:noRegion>TW9 3DS</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lexer, Christian" sort="Lexer, Christian" uniqKey="Lexer C" first="Christian" last="Lexer">Christian Lexer</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2008">2008</date>
<idno type="RBID">pubmed:21585752</idno>
<idno type="pmid">21585752</idno>
<idno type="doi">10.1111/j.1471-8286.2007.01919.x</idno>
<idno type="wicri:Area/Main/Corpus">003988</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003988</idno>
<idno type="wicri:Area/Main/Curation">003988</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">003988</idno>
<idno type="wicri:Area/Main/Exploration">003988</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">A set of novel DNA polymorphisms within candidate genes potentially involved in ecological divergence between Populus alba and P. tremula, two hybridizing European forest trees.</title>
<author>
<name sortKey="Joseph, Jeffrey A" sort="Joseph, Jeffrey A" uniqKey="Joseph J" first="Jeffrey A" last="Joseph">Jeffrey A. Joseph</name>
<affiliation wicri:level="1">
<nlm:affiliation>Jodrell Laboratory, Royal Botanic Gardens Kew, Richmond, Surrey, TW9 3DS, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Jodrell Laboratory, Royal Botanic Gardens Kew, Richmond, Surrey, TW9 3DS</wicri:regionArea>
<wicri:noRegion>TW9 3DS</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lexer, Christian" sort="Lexer, Christian" uniqKey="Lexer C" first="Christian" last="Lexer">Christian Lexer</name>
</author>
</analytic>
<series>
<title level="j">Molecular ecology resources</title>
<idno type="ISSN">1755-098X</idno>
<imprint>
<date when="2008" type="published">2008</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">We have identified 53 DNA (single nucleotide, microsatellite, and insertion-deletion) polymorphisms within 12 candidate genes potentially involved in ecological differences between Populus alba and P. tremula, two hybridizing European forest trees. The genes represent candidates for functional roles associated with abiotic or biotic stress response, cross-talk, phenology, and leaf development. Distributions within sequences, intraspecific levels of diversity, and genetic divergence (F(ST) ) between species are reported for each polymorphism, as are haplotype frequencies for each gene. The markers will be used for population genomic studies of the barrier to gene flow between these two ecologically divergent forest trees.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM">
<PMID Version="1">21585752</PMID>
<DateCompleted>
<Year>2013</Year>
<Month>07</Month>
<Day>04</Day>
</DateCompleted>
<DateRevised>
<Year>2011</Year>
<Month>05</Month>
<Day>18</Day>
</DateRevised>
<Article PubModel="Print">
<Journal>
<ISSN IssnType="Print">1755-098X</ISSN>
<JournalIssue CitedMedium="Print">
<Volume>8</Volume>
<Issue>1</Issue>
<PubDate>
<Year>2008</Year>
<Month>Jan</Month>
</PubDate>
</JournalIssue>
<Title>Molecular ecology resources</Title>
<ISOAbbreviation>Mol Ecol Resour</ISOAbbreviation>
</Journal>
<ArticleTitle>A set of novel DNA polymorphisms within candidate genes potentially involved in ecological divergence between Populus alba and P. tremula, two hybridizing European forest trees.</ArticleTitle>
<Pagination>
<MedlinePgn>188-92</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1111/j.1471-8286.2007.01919.x</ELocationID>
<Abstract>
<AbstractText>We have identified 53 DNA (single nucleotide, microsatellite, and insertion-deletion) polymorphisms within 12 candidate genes potentially involved in ecological differences between Populus alba and P. tremula, two hybridizing European forest trees. The genes represent candidates for functional roles associated with abiotic or biotic stress response, cross-talk, phenology, and leaf development. Distributions within sequences, intraspecific levels of diversity, and genetic divergence (F(ST) ) between species are reported for each polymorphism, as are haplotype frequencies for each gene. The markers will be used for population genomic studies of the barrier to gene flow between these two ecologically divergent forest trees.</AbstractText>
<CopyrightInformation>© 2007 The Authors.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Joseph</LastName>
<ForeName>Jeffrey A</ForeName>
<Initials>JA</Initials>
<AffiliationInfo>
<Affiliation>Jodrell Laboratory, Royal Botanic Gardens Kew, Richmond, Surrey, TW9 3DS, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Lexer</LastName>
<ForeName>Christian</ForeName>
<Initials>C</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo>
<Country>England</Country>
<MedlineTA>Mol Ecol Resour</MedlineTA>
<NlmUniqueID>101465604</NlmUniqueID>
<ISSNLinking>1755-098X</ISSNLinking>
</MedlineJournalInfo>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="entrez">
<Year>2011</Year>
<Month>5</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2008</Year>
<Month>1</Month>
<Day>1</Day>
<Hour>0</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2008</Year>
<Month>1</Month>
<Day>1</Day>
<Hour>0</Hour>
<Minute>1</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">21585752</ArticleId>
<ArticleId IdType="doi">10.1111/j.1471-8286.2007.01919.x</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>Royaume-Uni</li>
</country>
</list>
<tree>
<noCountry>
<name sortKey="Lexer, Christian" sort="Lexer, Christian" uniqKey="Lexer C" first="Christian" last="Lexer">Christian Lexer</name>
</noCountry>
<country name="Royaume-Uni">
<noRegion>
<name sortKey="Joseph, Jeffrey A" sort="Joseph, Jeffrey A" uniqKey="Joseph J" first="Jeffrey A" last="Joseph">Jeffrey A. Joseph</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 003A04 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 003A04 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PoplarV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:21585752
   |texte=   A set of novel DNA polymorphisms within candidate genes potentially involved in ecological divergence between Populus alba and P. tremula, two hybridizing European forest trees.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:21585752" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PoplarV1 

Wicri

This area was generated with Dilib version V0.6.37.
Data generation: Wed Nov 18 12:07:19 2020. Site generation: Wed Nov 18 12:16:31 2020